Table 1

Global statistics of the pig genome
(A) Sequencing
Insert size Total data (Gb) Sequence coverage (X)
Pair end library 170 ~ 800 bp 149 55
2 ~ 20 kb 62 23
Total 211 78
(B) Assembly
N50 (kb) Longest (kb) Size (Gb)
Contig 23.5 230 2.57
Scaffold 5,432 21,409 2.64
(C) Annotation
Number Total length (Mb) Percentage of genome
Repeats 4,172,488 1,008.6 38.2
Genes 20,326 597.3 22.6
CDS 181,843 31.2 1.2

CDS, Coding sequences.

Fang et al.

Fang et al. GigaScience 2012 1:16   doi:10.1186/2047-217X-1-16

Open Data